环境微生物(包括方兴未艾的肠道微生物)在不同的系统中发挥着的生态作用逐渐被意识到,我们对环境微生物实际上仍旧知之甚少,其多样性问题仍旧是一个非常基础和重要的课题。这次读的两篇文章都是关于波兰地区重金属污染地区的土壤微生物研究。

文献一:
Chodak M., Gołębiewski M., Morawska-Płoskonka J., Kuduk K. & Niklińska M. 2013. Diversity of microorganisms from forest soils differently polluted with heavy metals. Applied Soil Ecology. 64: 7–14. 
背景:

arge accumulation of heavy metals in organic layers of forest soils may adversely affect the structure and diversity of microbial communities.

实验内容:

The objective of this study was to assess the influence of different soil chemical properties on structure and diversity of microbial communities in soils polluted with different levels of heavy metals. The soil samples were taken at ten sites located in the vicinity of the cities of Legnica and Olkusz, differently polluted with Cu, Zn and Pb.

The samples were measured for pH and the contents of organic C (Corg), total N (Nt), total S (St) and total Zn, Cu and Pb. The measured gross microbial properties included microbial biomass (Cmic) and soil respiration (RESP).

The structure of soil microbial communities was assessed using phospholipid fatty acid (PLFA) analysis and the structure of soil bacterial communities using pyrosequencing of 16S rRNA genes.

To assess diversity of the bacterial communities the Chao1 index was calculated based on the pyrosequencing data.

结论:

For Cmic and RESP the most important factors were Nt and Corg, respectively. The structure and diversity of soil microbial communities revealed by PLFA profiles and pyrosequencing depended mainly on soil pH. The effect of high heavy metal contents on soil microbial properties was weaker compared with other soil properties.

High

concentrations of heavy metals negatively affected RESP and the Chao1 diversity index. The heavy metal

pollution altered the structure of microbial communities measured with PLFA analysis, but the effect of

heavy metal pollution was not observed for the structure of soil bacteria measured by pyrosequencing. (PLFA比16S更敏感地反映环境对微生物群落结构的影响)

最终结果:

The obtained results indicate that the use of soil microbial properties to study heavy metal effects may be difficult due to confounding influences of other environmental factors.

主要数据分析手段:cca
文献二:
Gołębiewski M., Deja-Sikora E., Cichosz M., Tretyn A. & Wróbel B. 2014. 16S rDNA Pyrosequencing Analysis of Bacterial Community in Heavy Metals Polluted Soils. Microb Ecol. 67: 635–647. 
背景:Soil contamination with heavy metals is a widespread

problem, especially prominent on grounds lying in the

vicinity of mines, smelters, and other industrial facilities.

试验体系:Many such areas are located in Southern Poland; they are

polluted mainly with Pb, Zn, Cd, or Cu, and locally also with

Cr. As for now, little is

known about most bacterial species

thriving in such soils and even less about a core bacterial

community—a set of taxa common to polluted soils. Therefore,

we wanted to answer the question if such a set could be

found in samples differing physicochemically and

phytosociologically. To answer the question, we analyzed

bacterial communities in three soil samples contaminated with

Pb and Zn and two contaminated with Cr and lower levels of

Pb and Zn. The communities were assessed with 16S rRNA gene fragments pyrosequencing.

结论:

It was found that the samples

differed significantly and Zn decreased both diversity and

species richness at species and family levels, while plant 

species richness did not correlate with bacterial diversity. In

spite of the differences between the samples, they shared

many operational taxonomic units (OTUs) and it was possible

to delineate the core microbiome of our sample set. The core

set of OTUs comprised members of such taxa as

Sphingomonas, Candidatus Solibacter, or Flexibacter showing

that particular genera might be shared among sites ~40 km

distant.

总结:发表这两篇文章的两个期刊的IF(两三个点)在生态学领域不是很低,但两篇文章都是味同嚼蜡,基本上都是流水账,在方法及结论上并没有特别的亮点。一般而言,我跨领域半个小时能读懂的论文(Nature级别的例外,大工不巧),我都不认为是好的论文。

第一篇文章,故事相对完整。主要是用主成份分析分析了不同环境因子对土壤微生物多样性的影响,“PH是影响微生物群落结构的主要因素”这个观点再次得到验证;实验用了两种方法检测微生物多样性,其敏感性差异也是预料之中的。本论文的观点是,在所研究区域其他环境因子对微生物群落结构的影响遮蔽了重金属污染的作用。

第二篇文章,我则觉得属于描述性论文,就是比较低等的论文。比较有意思的结论是,本文利用16s的方法检测到了Zn污染对微生物多样性的影响,而上一篇没有检测到这种影响,生态学上这样的相反的结论很多,也很正常,关键能够自圆其说,最终把结论推广后实践就更好了。另外,本文没有检测到植被植物丰富度的影响。

生词:

respiration 呼吸

vicinity附近

(备注:标黄色底色为实验要点,红色是运用比较好的动词形容词等,粗体是专业词汇)

转载于:https://www.cnblogs.com/liulele/p/6392351.html

两篇波兰地区重金属污染地区土壤微生物多样性的研究相关推荐

  1. 酸了!她在MSRA实习短短半年时间内便完成了两篇入选顶级学术会议 AAAI、ACL 的研究...

    来自:微软学术合作 博士二年级,南开大学-微软亚洲研究院联合培养博士生.微软亚洲研究院自然语言组实习生王程一在短短半年时间内便完成了两篇入选顶级学术会议 AAAI.ACL 的研究.看似"发文 ...

  2. 北航成AAAI 2021最大赢家,两篇一作斩获最佳论文、提名奖,研究皆与Transformer相关...

    杨净 发自 凹非寺 量子位 报道 | 公众号 QbitAI 当地时间2月4日,AAAI 2021最佳论文奖出炉! 由AAAI 2021程序委员会主席Mausam在开幕式上宣布,共有3篇论文获得了最佳论 ...

  3. 欧康维视收购诺华制药两款眼科产品中国大陆地区所有权益;上海生物医药创新转化基金正式启动 | 医药健闻...

    | 行业焦点 欧康维视收购诺华制药两款眼科产品中国大陆地区所有权益.欧康维视(Ocumension Therapeutics)宣布与全球知名医药企业诺华制药(Novartis)达成产品收购协议,欧康维 ...

  4. 中科院遗传发育所农业资源中心李小方组生物信息博后招聘-重金属污染方向

    中国科学院遗传与发育生物学研究所农业资源研究中心(以下简称:中心)李小方研究组现向海内外公开招聘特别研究助理1名.李小方研究组主要面向农业系统重金属污染防控,以发展现代生物技术为主要研究目标,开展从基 ...

  5. EM: 生而为菌,自强不息-嗜酸杆菌在重金属污染土壤中的生态适应性机制

    宏基因组分析揭示了重金属污染土壤中嗜酸杆菌纲菌的代谢潜力 Metabolic potentials of members of the class Acidobacteriia in metal-co ...

  6. 自然》子刊同期刊发两篇重磅论文:月球上的水很多-1

    是的,月球上有水.这个结果再一次被证实,未来人类甚至可能更广泛地采集到它们. 美国国家航空航天局(NASA)的最新研究发现,月球上可能有多达 6 亿吨的水冰,有一天有望帮助登月者长期生存,它甚至可以变 ...

  7. 城市表层土壤重金属污染分析

    (额外补充:因为CSDN的编辑器现在对公式不太友好,所以公式都使用的图片.因为时间问题matlab代码已经找不到了,只保留了python代码.代码数据论文已经开源,Github地址,遵循apache2 ...

  8. 计算机科学与技术论文摘要范文,计算机科学与技术论文范文两篇(2)

    计算机科学与技术论文范文篇二 浅谈计算机科学与技术特色专业建设 摘 要 本文从特色专业建设在学校建设中的地位着手,首先从培养目标.专业定位.培养教学计划等方面分析了计算机科学与技术专业建设存在的问题, ...

  9. HTML5音乐播放器的收获体会,音乐课的收获和心得【两篇】

    [导语]所谓心得就是工作或学习中的体验和领悟到的东西,亦可以称作心得体会."心得体会"是一种日常应用文体,属于议论文的范畴.一般篇幅可长可短,结构比较简单.下面是由无忧考网为大家整 ...

最新文章

  1. webbrowser php,C# WinForm WebBrowser 设置为编辑模式的示例代码
  2. solaris下常见文件压缩/解压方式简单小结—待续中
  3. java中使用es精准查询_使用ES简单查询语句须知
  4. php常见漏洞修复,phpstudy漏洞修复方法
  5. js之函数设置默认值传参
  6. Intel(R) 处理器产品架构/微架构对照表
  7. 微信小程序云开发教程-一个js文件如何包含多个云函数
  8. redhat7linux防火墙开放端口,Redhat7 firewall(防火墙)
  9. iPhone屏幕尺寸、分辨率及适配
  10. qqxml卡片 php代码,qqxml卡
  11. Bridge 双维度扩展
  12. SpringMVC在返回JSON数据时出现406错误解决方案
  13. 一次失败的Thoughtworks面试经历
  14. 计算机三级网络技术大题详解,教你快速拿到60分,附三级题库绿色免安装
  15. Neo4j-Cypher
  16. 2022年低压电工考试内容及低压电工模拟考试题库
  17. 基金从业资格考试(科目二):证券投资基金(第二版)上册 学习笔记
  18. 关于SG/SP, GG/GP的一点个人理解
  19. 作为有经验的程序员如果不懂Lambda表达式就说不过去了吧,建议收藏!!!
  20. redis 常用监控指标

热门文章

  1. 【北航oj】(线段树取模运算)
  2. 【51nod - 1076】2条不相交的路径(Tarjan无向图判环)
  3. 【HDU - 1559】最大子矩阵 (二维前缀和裸题)
  4. 【HDU - 1326】Box of Bricks(模拟水题)
  5. 机器学习笔记(1):Introduction
  6. xml控制html样式,XML与CSS综合设置实例
  7. Linux学习:第二章-Linux安装
  8. 关键字typedef、关键字using、auto类型说明符和declytpe类型指示符
  9. PaperNotes(19)-Learning Lane Graph Representations for Motion Forecasting
  10. php if !=,php If else 用法